Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 AC027796.2-201ENST00000575326 344 ntBASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AC023274.1-201ENST00000418278 595 ntBASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 LAGE3P1-201ENST00000425356 484 ntBASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AP000867.4-201ENST00000641616 219 ntBASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AC134684.3-201ENST00000641758 218 ntBASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.94■■□□□ 1.42
CSB-PGBD3P0DP91 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CSB-PGBD3P0DP91 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 AC009947.1-201ENST00000444350 727 ntBASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 AC002347.1-201ENST00000569543 541 ntBASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CSB-PGBD3P0DP91 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms