Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL450487.1-201ENST00000426799 995 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 EMBP1-201ENST00000458200 901 ntBASIC16.46■□□□□ 0.23
FREM3P0C091 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.46■□□□□ 0.23
FREM3P0C091 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.46■□□□□ 0.23
FREM3P0C091 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.46■□□□□ 0.23
FREM3P0C091 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FREM3P0C091 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FREM3P0C091 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 AP002414.4-201ENST00000589764 1148 ntBASIC16.45■□□□□ 0.22
FREM3P0C091 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 KRT18P1-202ENST00000452408 1331 ntBASIC16.45■□□□□ 0.22
FREM3P0C091 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
FREM3P0C091 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.45■□□□□ 0.22
FREM3P0C091 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.45■□□□□ 0.22
FREM3P0C091 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FREM3P0C091 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FREM3P0C091 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.44■□□□□ 0.22
FREM3P0C091 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FREM3P0C091 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.44■□□□□ 0.22
FREM3P0C091 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.44■□□□□ 0.22
FREM3P0C091 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.44■□□□□ 0.22
FREM3P0C091 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FREM3P0C091 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.44■□□□□ 0.22
FREM3P0C091 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 AC135776.1-201ENST00000319817 2481 ntBASIC16.43■□□□□ 0.22
FREM3P0C091 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.43■□□□□ 0.22
FREM3P0C091 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.43■□□□□ 0.22
FREM3P0C091 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 GMCL1P1-201ENST00000463439 1581 ntBASIC16.43■□□□□ 0.22
FREM3P0C091 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.43■□□□□ 0.22
FREM3P0C091 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 AC079781.3-201ENST00000449110 356 ntBASIC16.43■□□□□ 0.22
FREM3P0C091 KRT126P-201ENST00000549467 1181 ntBASIC16.43■□□□□ 0.22
FREM3P0C091 AP005901.3-202ENST00000581653 237 ntBASIC16.43■□□□□ 0.22
FREM3P0C091 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
FREM3P0C091 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.43■□□□□ 0.22
FREM3P0C091 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms