Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 SLC25A6P5-201ENST00000435663 894 ntBASIC18.79■□□□□ 0.6
CD48P09326 BX664615.1-201ENST00000443558 458 ntBASIC18.79■□□□□ 0.6
CD48P09326 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.79■□□□□ 0.6
CD48P09326 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.79■□□□□ 0.6
CD48P09326 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.79■□□□□ 0.6
CD48P09326 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 LINC00167-201ENST00000530583 1419 ntBASIC18.79■□□□□ 0.6
CD48P09326 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD48P09326 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD48P09326 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD48P09326 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD48P09326 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD48P09326 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CD48P09326 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CD48P09326 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 AC092597.1-201ENST00000487352 616 ntBASIC18.78■□□□□ 0.6
CD48P09326 AC034232.1-201ENST00000506026 1064 ntBASIC18.78■□□□□ 0.6
CD48P09326 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.78■□□□□ 0.6
CD48P09326 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.78■□□□□ 0.6
CD48P09326 AL391807.1-203ENST00000604392 2365 ntBASIC18.78■□□□□ 0.6
CD48P09326 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.78■□□□□ 0.6
CD48P09326 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD48P09326 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD48P09326 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CD48P09326 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 LINC00602-201ENST00000629776 2065 ntBASIC18.77■□□□□ 0.6
CD48P09326 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.77■□□□□ 0.6
CD48P09326 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CD48P09326 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.77■□□□□ 0.6
CD48P09326 KRT18P38-201ENST00000449496 1282 ntBASIC18.77■□□□□ 0.6
CD48P09326 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.77■□□□□ 0.6
CD48P09326 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.77■□□□□ 0.6
CD48P09326 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.77■□□□□ 0.6
CD48P09326 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.77■□□□□ 0.6
CD48P09326 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CD48P09326 LINC01023-201ENST00000606054 436 ntBASIC18.77■□□□□ 0.6
CD48P09326 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.77■□□□□ 0.6
CD48P09326 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CD48P09326 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD48P09326 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CD48P09326 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.77■□□□□ 0.59
CD48P09326 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.77■□□□□ 0.59
CD48P09326 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CD48P09326 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 LTB4R2-202ENST00000528054 3092 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms