Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RB1P06400 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RB1P06400 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
RB1P06400 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.11■□□□□ 0.65
RB1P06400 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RB1P06400 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.11■□□□□ 0.65
RB1P06400 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RB1P06400 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.11■□□□□ 0.65
RB1P06400 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
RB1P06400 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.11■□□□□ 0.65
RB1P06400 MCCD1P2-201ENST00000423228 335 ntBASIC19.11■□□□□ 0.65
RB1P06400 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.11■□□□□ 0.65
RB1P06400 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.11■□□□□ 0.65
RB1P06400 AC064836.3-201ENST00000607928 673 ntBASIC19.11■□□□□ 0.65
RB1P06400 AC073592.4-201ENST00000623827 446 ntBASIC19.11■□□□□ 0.65
RB1P06400 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
RB1P06400 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.11■□□□□ 0.65
RB1P06400 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
RB1P06400 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.11■□□□□ 0.65
RB1P06400 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RB1P06400 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RB1P06400 PMPCAP1-201ENST00000508114 1576 ntBASIC19.1■□□□□ 0.65
RB1P06400 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.1■□□□□ 0.65
RB1P06400 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.1■□□□□ 0.65
RB1P06400 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.1■□□□□ 0.65
RB1P06400 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.1■□□□□ 0.65
RB1P06400 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
RB1P06400 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RB1P06400 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RB1P06400 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
RB1P06400 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RB1P06400 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.09■□□□□ 0.65
RB1P06400 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
RB1P06400 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 AC007967.3-201ENST00000434308 558 ntBASIC19.09■□□□□ 0.65
RB1P06400 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.09■□□□□ 0.65
RB1P06400 BX005266.1-201ENST00000473402 457 ntBASIC19.09■□□□□ 0.65
RB1P06400 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.09■□□□□ 0.65
RB1P06400 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.09■□□□□ 0.65
RB1P06400 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.09■□□□□ 0.65
RB1P06400 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.09■□□□□ 0.65
RB1P06400 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RB1P06400 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.09■□□□□ 0.65
RB1P06400 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.09■□□□□ 0.65
RB1P06400 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 AL158211.5-201ENST00000623583 2518 ntBASIC19.09■□□□□ 0.65
RB1P06400 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
RB1P06400 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RB1P06400 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
RB1P06400 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RB1P06400 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RB1P06400 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RB1P06400 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RB1P06400 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.08■□□□□ 0.65
RB1P06400 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RB1P06400 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RB1P06400 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RB1P06400 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.08■□□□□ 0.64
RB1P06400 AC073621.1-201ENST00000392730 636 ntBASIC19.08■□□□□ 0.64
RB1P06400 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.08■□□□□ 0.64
RB1P06400 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.08■□□□□ 0.64
RB1P06400 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 AC122714.2-201ENST00000502787 707 ntBASIC19.08■□□□□ 0.64
RB1P06400 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.08■□□□□ 0.64
RB1P06400 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 AC005829.1-201ENST00000570002 483 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms