Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 AL031133.1-201ENST00000406807 723 ntBASIC18.39■□□□□ 0.53
HLA-DQB2P05538 AP003733.1-201ENST00000491725 852 ntBASIC18.39■□□□□ 0.53
HLA-DQB2P05538 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.39■□□□□ 0.53
HLA-DQB2P05538 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 AC008764.6-201ENST00000595909 2069 ntBASIC18.38■□□□□ 0.53
HLA-DQB2P05538 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 IGHGP-201ENST00000390555 1178 ntBASIC18.38■□□□□ 0.53
HLA-DQB2P05538 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 RNF126P1-202ENST00000569893 925 ntBASIC18.38■□□□□ 0.53
HLA-DQB2P05538 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.38■□□□□ 0.53
HLA-DQB2P05538 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 NOC2LP2-201ENST00000407594 1944 ntBASIC18.37■□□□□ 0.53
HLA-DQB2P05538 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HLA-DQB2P05538 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 AL645929.1-201ENST00000420084 975 ntBASIC18.36■□□□□ 0.53
HLA-DQB2P05538 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DQB2P05538 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms