Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL135905.2-201ENST00000584934 1404 ntBASIC16.45■□□□□ 0.22
HMGN1P05114 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGN1P05114 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGN1P05114 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGN1P05114 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGN1P05114 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGN1P05114 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGN1P05114 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
HMGN1P05114 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGN1P05114 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGN1P05114 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HMGN1P05114 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.43■□□□□ 0.22
HMGN1P05114 FAM197Y1-201ENST00000421178 764 ntBASIC16.43■□□□□ 0.22
HMGN1P05114 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.43■□□□□ 0.22
HMGN1P05114 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HMGN1P05114 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGN1P05114 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGN1P05114 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGN1P05114 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 AL645608.8-201ENST00000606034 2086 ntBASIC16.42■□□□□ 0.22
HMGN1P05114 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
HMGN1P05114 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGN1P05114 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGN1P05114 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGN1P05114 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGN1P05114 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGN1P05114 AC116562.2-201ENST00000507042 360 ntBASIC16.42■□□□□ 0.22
HMGN1P05114 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGN1P05114 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGN1P05114 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGN1P05114 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGN1P05114 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGN1P05114 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGN1P05114 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGN1P05114 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms