Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.06■□□□□ 0.96
COL2A1P02458 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.06■□□□□ 0.96
COL2A1P02458 AL022326.1-202ENST00000641533 845 ntBASIC21.06■□□□□ 0.96
COL2A1P02458 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.06■□□□□ 0.96
COL2A1P02458 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 AL353593.2-201ENST00000602529 1483 ntBASIC21.06■□□□□ 0.96
COL2A1P02458 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL2A1P02458 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
COL2A1P02458 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL2A1P02458 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL2A1P02458 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 AC103564.2-201ENST00000432853 1299 ntBASIC21.05■□□□□ 0.96
COL2A1P02458 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL2A1P02458 POLD2P1-201ENST00000511220 997 ntBASIC21.05■□□□□ 0.96
COL2A1P02458 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.05■□□□□ 0.96
COL2A1P02458 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.05■□□□□ 0.96
COL2A1P02458 Z83851.2-201ENST00000609564 659 ntBASIC21.05■□□□□ 0.96
COL2A1P02458 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL2A1P02458 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COL2A1P02458 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.04■□□□□ 0.96
COL2A1P02458 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
COL2A1P02458 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 KRT18P13-201ENST00000400056 1290 ntBASIC21.04■□□□□ 0.96
COL2A1P02458 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.04■□□□□ 0.96
COL2A1P02458 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.04■□□□□ 0.96
COL2A1P02458 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.04■□□□□ 0.96
COL2A1P02458 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.04■□□□□ 0.96
COL2A1P02458 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL2A1P02458 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL2A1P02458 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 COX5BP2-201ENST00000392354 334 ntBASIC21.03■□□□□ 0.96
COL2A1P02458 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.03■□□□□ 0.96
COL2A1P02458 PRYP5-201ENST00000451909 266 ntBASIC21.03■□□□□ 0.96
COL2A1P02458 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.03■□□□□ 0.96
COL2A1P02458 AC105339.3-201ENST00000560043 636 ntBASIC21.03■□□□□ 0.96
COL2A1P02458 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 FAM197Y3-203ENST00000618346 717 ntBASIC21.03■□□□□ 0.96
COL2A1P02458 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.03■□□□□ 0.96
COL2A1P02458 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
COL2A1P02458 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.03■□□□□ 0.96
COL2A1P02458 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL2A1P02458 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.02■□□□□ 0.96
COL2A1P02458 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL2A1P02458 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.02■□□□□ 0.96
COL2A1P02458 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.02■□□□□ 0.96
COL2A1P02458 AL591424.1-201ENST00000442569 1213 ntBASIC21.02■□□□□ 0.96
COL2A1P02458 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.02■□□□□ 0.96
COL2A1P02458 AC092910.1-201ENST00000482027 1129 ntBASIC21.02■□□□□ 0.96
COL2A1P02458 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.02■□□□□ 0.96
COL2A1P02458 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.02■□□□□ 0.96
COL2A1P02458 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL2A1P02458 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 AC104109.2-201ENST00000602919 1418 ntBASIC21.02■□□□□ 0.96
COL2A1P02458 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL2A1P02458 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COL2A1P02458 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
COL2A1P02458 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.02■□□□□ 0.95
COL2A1P02458 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
COL2A1P02458 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
COL2A1P02458 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL2A1P02458 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL2A1P02458 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.01■□□□□ 0.95
COL2A1P02458 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
COL2A1P02458 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.01■□□□□ 0.95
COL2A1P02458 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.01■□□□□ 0.95
COL2A1P02458 BX005266.1-201ENST00000473402 457 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms