Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
TRACP01848 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.81□□□□□ -0.52
TRACP01848 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
TRACP01848 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 SLC7A5P1-201ENST00000568957 537 ntBASIC11.81□□□□□ -0.52
TRACP01848 MFSD11-216ENST00000590393 1141 ntBASIC11.81□□□□□ -0.52
TRACP01848 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.81□□□□□ -0.52
TRACP01848 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC11.81□□□□□ -0.52
TRACP01848 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.81□□□□□ -0.52
TRACP01848 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRACP01848 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRACP01848 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
TRACP01848 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 CALM3-202ENST00000391918 702 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC11.8□□□□□ -0.52
TRACP01848 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC11.8□□□□□ -0.52
TRACP01848 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TRACP01848 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRACP01848 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRACP01848 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRACP01848 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TRACP01848 CROCCP2-202ENST00000412962 2773 ntBASIC11.79□□□□□ -0.52
TRACP01848 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TRACP01848 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 KRT8P45-201ENST00000414328 1447 ntBASIC11.79□□□□□ -0.52
TRACP01848 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.79□□□□□ -0.52
TRACP01848 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 AC106886.4-201ENST00000623557 2502 ntBASIC11.79□□□□□ -0.52
TRACP01848 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRACP01848 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms