Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRBV12-3P01733 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRBV12-3P01733 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 Z83836.1-201ENST00000624605 1642 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 PCED1CP-201ENST00000419887 785 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 AC005332.3-201ENST00000589904 676 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 AC004263.2-201ENST00000617183 678 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 AL358472.4-201ENST00000633140 710 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRBV12-3P01733 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 AC132938.6-201ENST00000623828 1655 ntBASIC14.01□□□□□ -0.17
TRBV12-3P01733 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRBV12-3P01733 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRBV12-3P01733 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRBV12-3P01733 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14□□□□□ -0.17
TRBV12-3P01733 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 IGHGP-201ENST00000390555 1178 ntBASIC14□□□□□ -0.17
TRBV12-3P01733 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14□□□□□ -0.17
TRBV12-3P01733 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14□□□□□ -0.17
TRBV12-3P01733 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14□□□□□ -0.17
TRBV12-3P01733 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14□□□□□ -0.17
TRBV12-3P01733 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 AC093010.1-201ENST00000473625 1624 ntBASIC14□□□□□ -0.17
TRBV12-3P01733 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRBV12-3P01733 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14□□□□□ -0.17
TRBV12-3P01733 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 LINC00167-201ENST00000530583 1419 ntBASIC13.99□□□□□ -0.17
TRBV12-3P01733 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRBV12-3P01733 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRBV12-3P01733 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms