Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19■□□□□ 0.63
TRUB2O95900 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRUB2O95900 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRUB2O95900 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19■□□□□ 0.63
TRUB2O95900 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19■□□□□ 0.63
TRUB2O95900 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB2O95900 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB2O95900 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
TRUB2O95900 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB2O95900 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 AP003733.1-201ENST00000491725 852 ntBASIC18.99■□□□□ 0.63
TRUB2O95900 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.99■□□□□ 0.63
TRUB2O95900 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB2O95900 AC008687.5-201ENST00000593746 558 ntBASIC18.99■□□□□ 0.63
TRUB2O95900 AC116407.4-201ENST00000623319 1061 ntBASIC18.99■□□□□ 0.63
TRUB2O95900 AL358472.4-201ENST00000633140 710 ntBASIC18.99■□□□□ 0.63
TRUB2O95900 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.99■□□□□ 0.63
TRUB2O95900 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRUB2O95900 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.99■□□□□ 0.63
TRUB2O95900 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB2O95900 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB2O95900 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB2O95900 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRUB2O95900 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB2O95900 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB2O95900 RNF126P1-202ENST00000569893 925 ntBASIC18.98■□□□□ 0.63
TRUB2O95900 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.98■□□□□ 0.63
TRUB2O95900 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRUB2O95900 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.98■□□□□ 0.63
TRUB2O95900 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.98■□□□□ 0.63
TRUB2O95900 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.98■□□□□ 0.63
TRUB2O95900 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.98■□□□□ 0.63
TRUB2O95900 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRUB2O95900 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 AP000997.3-201ENST00000623333 2250 ntBASIC18.97■□□□□ 0.63
TRUB2O95900 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.97■□□□□ 0.63
TRUB2O95900 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.97■□□□□ 0.63
TRUB2O95900 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.97■□□□□ 0.63
TRUB2O95900 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms