Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX4O95219 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX4O95219 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX4O95219 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX4O95219 AC106820.2-201ENST00000563775 3264 ntBASIC17.06■□□□□ 0.32
SNX4O95219 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNX4O95219 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX4O95219 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 HEIH-201ENST00000623091 1652 ntBASIC17.05■□□□□ 0.32
SNX4O95219 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX4O95219 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX4O95219 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
SNX4O95219 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SNX4O95219 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX4O95219 AC112497.1-201ENST00000624824 639 ntBASIC17.05■□□□□ 0.32
SNX4O95219 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SNX4O95219 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX4O95219 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX4O95219 AC099398.1-201ENST00000567919 2776 ntBASIC17.05■□□□□ 0.32
SNX4O95219 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX4O95219 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SNX4O95219 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX4O95219 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 AC034236.2-201ENST00000606662 1610 ntBASIC17.04■□□□□ 0.32
SNX4O95219 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SNX4O95219 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX4O95219 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX4O95219 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX4O95219 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX4O95219 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.04■□□□□ 0.32
SNX4O95219 AC034232.1-201ENST00000506026 1064 ntBASIC17.04■□□□□ 0.32
SNX4O95219 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX4O95219 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX4O95219 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 AC083906.6-201ENST00000641366 219 ntBASIC17.04■□□□□ 0.32
SNX4O95219 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
SNX4O95219 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX4O95219 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX4O95219 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX4O95219 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNX4O95219 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX4O95219 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
SNX4O95219 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX4O95219 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX4O95219 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNX4O95219 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms