Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN11O75508 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN11O75508 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN11O75508 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN11O75508 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN11O75508 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN11O75508 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN11O75508 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN11O75508 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN11O75508 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN11O75508 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN11O75508 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CLDN11O75508 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN11O75508 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN11O75508 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN11O75508 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CLDN11O75508 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN11O75508 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN11O75508 AC022898.2-201ENST00000616822 1312 ntBASIC18.48■□□□□ 0.55
CLDN11O75508 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN11O75508 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDN11O75508 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN11O75508 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 KRT17P6-201ENST00000453795 1220 ntBASIC18.47■□□□□ 0.55
CLDN11O75508 AC104819.1-201ENST00000504587 486 ntBASIC18.47■□□□□ 0.55
CLDN11O75508 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN11O75508 AC112698.1-201ENST00000510299 916 ntBASIC18.47■□□□□ 0.55
CLDN11O75508 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN11O75508 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN11O75508 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN11O75508 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CLDN11O75508 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
CLDN11O75508 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN11O75508 AL020996.1-203ENST00000536896 2307 ntBASIC18.46■□□□□ 0.55
CLDN11O75508 BCL2-203ENST00000589955 5011 ntBASIC18.46■□□□□ 0.55
CLDN11O75508 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CLDN11O75508 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN11O75508 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN11O75508 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CLDN11O75508 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLDN11O75508 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN11O75508 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN11O75508 AC074051.2-201ENST00000565115 352 ntBASIC18.46■□□□□ 0.55
CLDN11O75508 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CLDN11O75508 CLEC4GP1-201ENST00000596555 870 ntBASIC18.46■□□□□ 0.55
CLDN11O75508 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN11O75508 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN11O75508 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN11O75508 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms