Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
KDELR3O43731 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KDELR3O43731 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.35■□□□□ 0.53
KDELR3O43731 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.35■□□□□ 0.53
KDELR3O43731 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 AL845331.1-201ENST00000424978 1190 ntBASIC18.35■□□□□ 0.53
KDELR3O43731 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 AC112698.1-201ENST00000510299 916 ntBASIC18.35■□□□□ 0.53
KDELR3O43731 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.35■□□□□ 0.53
KDELR3O43731 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.35■□□□□ 0.53
KDELR3O43731 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KDELR3O43731 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KDELR3O43731 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.34■□□□□ 0.53
KDELR3O43731 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.34■□□□□ 0.53
KDELR3O43731 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
KDELR3O43731 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.34■□□□□ 0.53
KDELR3O43731 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KDELR3O43731 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KDELR3O43731 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.34■□□□□ 0.53
KDELR3O43731 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KDELR3O43731 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
KDELR3O43731 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.53
KDELR3O43731 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.33■□□□□ 0.53
KDELR3O43731 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.33■□□□□ 0.53
KDELR3O43731 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KDELR3O43731 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
KDELR3O43731 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 AC233702.3-201ENST00000578656 1387 ntBASIC18.33■□□□□ 0.53
KDELR3O43731 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.33■□□□□ 0.53
KDELR3O43731 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KDELR3O43731 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 AC246785.2-201ENST00000432512 513 ntBASIC18.33■□□□□ 0.52
KDELR3O43731 HCG4P8-203ENST00000443049 980 ntBASIC18.33■□□□□ 0.52
KDELR3O43731 LINC00265-3P-201ENST00000447588 903 ntBASIC18.33■□□□□ 0.52
KDELR3O43731 TOB2P1-201ENST00000469761 992 ntBASIC18.33■□□□□ 0.52
KDELR3O43731 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.33■□□□□ 0.52
KDELR3O43731 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.33■□□□□ 0.52
KDELR3O43731 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.33■□□□□ 0.52
KDELR3O43731 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.33■□□□□ 0.52
KDELR3O43731 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KDELR3O43731 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms