Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 BCL2-203ENST00000589955 5011 ntBASIC20.37■□□□□ 0.85
CHMP2AO43633 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CHMP2AO43633 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
CHMP2AO43633 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 TOB2P1-201ENST00000469761 992 ntBASIC20.37■□□□□ 0.85
CHMP2AO43633 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.37■□□□□ 0.85
CHMP2AO43633 TPSP2-201ENST00000561760 610 ntBASIC20.37■□□□□ 0.85
CHMP2AO43633 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.37■□□□□ 0.85
CHMP2AO43633 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.37■□□□□ 0.85
CHMP2AO43633 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHMP2AO43633 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CHMP2AO43633 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.36■□□□□ 0.85
CHMP2AO43633 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CHMP2AO43633 AP000867.3-201ENST00000524675 377 ntBASIC20.36■□□□□ 0.85
CHMP2AO43633 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 AC012313.10-201ENST00000623509 926 ntBASIC20.36■□□□□ 0.85
CHMP2AO43633 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP2AO43633 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP2AO43633 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP2AO43633 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2AO43633 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHMP2AO43633 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2AO43633 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP2AO43633 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMP2AO43633 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP2AO43633 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2AO43633 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMP2AO43633 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP2AO43633 AC132938.6-201ENST00000623828 1655 ntBASIC20.35■□□□□ 0.85
CHMP2AO43633 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 AC093677.2-201ENST00000600169 1863 ntBASIC20.35■□□□□ 0.85
CHMP2AO43633 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP2AO43633 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CHMP2AO43633 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CHMP2AO43633 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 AL096828.2-201ENST00000567259 1965 ntBASIC20.34■□□□□ 0.85
CHMP2AO43633 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CHMP2AO43633 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP2AO43633 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHMP2AO43633 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CHMP2AO43633 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP2AO43633 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms