Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.8■□□□□ 0.6
MSI1O43347 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.8■□□□□ 0.6
MSI1O43347 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
MSI1O43347 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.8■□□□□ 0.6
MSI1O43347 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.8■□□□□ 0.6
MSI1O43347 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 AC093010.1-201ENST00000473625 1624 ntBASIC18.8■□□□□ 0.6
MSI1O43347 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.8■□□□□ 0.6
MSI1O43347 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.8■□□□□ 0.6
MSI1O43347 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSI1O43347 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.8■□□□□ 0.6
MSI1O43347 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
MSI1O43347 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.79■□□□□ 0.6
MSI1O43347 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.79■□□□□ 0.6
MSI1O43347 AP000867.3-201ENST00000524675 377 ntBASIC18.79■□□□□ 0.6
MSI1O43347 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.79■□□□□ 0.6
MSI1O43347 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.79■□□□□ 0.6
MSI1O43347 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 CLEC4GP1-201ENST00000596555 870 ntBASIC18.79■□□□□ 0.6
MSI1O43347 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.79■□□□□ 0.6
MSI1O43347 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.79■□□□□ 0.6
MSI1O43347 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.79■□□□□ 0.6
MSI1O43347 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
MSI1O43347 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MSI1O43347 REXO1L9P-201ENST00000604264 2108 ntBASIC18.79■□□□□ 0.6
MSI1O43347 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.79■□□□□ 0.6
MSI1O43347 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSI1O43347 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MSI1O43347 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
MSI1O43347 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.78■□□□□ 0.6
MSI1O43347 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.78■□□□□ 0.6
MSI1O43347 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
MSI1O43347 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.78■□□□□ 0.6
MSI1O43347 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSI1O43347 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MSI1O43347 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MSI1O43347 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.77■□□□□ 0.6
MSI1O43347 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.77■□□□□ 0.6
MSI1O43347 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSI1O43347 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.77■□□□□ 0.6
MSI1O43347 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms