Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.97□□□□□ -0.33
PAX4O43316 AC010203.1-204ENST00000548782 407 ntBASIC12.97□□□□□ -0.33
PAX4O43316 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.97□□□□□ -0.33
PAX4O43316 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.97□□□□□ -0.33
PAX4O43316 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.97□□□□□ -0.33
PAX4O43316 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.97□□□□□ -0.33
PAX4O43316 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.97□□□□□ -0.33
PAX4O43316 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.97□□□□□ -0.33
PAX4O43316 AC012306.2-201ENST00000609350 630 ntBASIC12.97□□□□□ -0.33
PAX4O43316 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.97□□□□□ -0.33
PAX4O43316 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.97□□□□□ -0.33
PAX4O43316 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.97□□□□□ -0.33
PAX4O43316 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PAX4O43316 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.97□□□□□ -0.33
PAX4O43316 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
PAX4O43316 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.97□□□□□ -0.33
PAX4O43316 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PAX4O43316 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.97□□□□□ -0.33
PAX4O43316 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PAX4O43316 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
PAX4O43316 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
PAX4O43316 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 AC005521.1-201ENST00000393351 872 ntBASIC12.96□□□□□ -0.33
PAX4O43316 BX664615.1-201ENST00000443558 458 ntBASIC12.96□□□□□ -0.33
PAX4O43316 COX11P1-201ENST00000489116 835 ntBASIC12.96□□□□□ -0.33
PAX4O43316 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 AC104390.1-201ENST00000555663 520 ntBASIC12.96□□□□□ -0.33
PAX4O43316 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PAX4O43316 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 AL138966.2-201ENST00000621997 464 ntBASIC12.96□□□□□ -0.33
PAX4O43316 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 AL163051.1-201ENST00000569214 1512 ntBASIC12.96□□□□□ -0.33
PAX4O43316 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.96□□□□□ -0.33
PAX4O43316 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PAX4O43316 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.96□□□□□ -0.34
PAX4O43316 AC018470.1-201ENST00000624790 3129 ntBASIC12.96□□□□□ -0.34
PAX4O43316 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.96□□□□□ -0.34
PAX4O43316 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
PAX4O43316 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.96□□□□□ -0.34
PAX4O43316 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.96□□□□□ -0.34
PAX4O43316 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
PAX4O43316 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.96□□□□□ -0.34
PAX4O43316 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.96□□□□□ -0.34
PAX4O43316 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PAX4O43316 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
PAX4O43316 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PAX4O43316 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PAX4O43316 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PAX4O43316 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PAX4O43316 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms