Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NTN3O00634 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.1■□□□□ 0.33
NTN3O00634 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NTN3O00634 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NTN3O00634 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
NTN3O00634 AC010460.3-201ENST00000511359 1579 ntBASIC17.1■□□□□ 0.33
NTN3O00634 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NTN3O00634 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NTN3O00634 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
NTN3O00634 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
NTN3O00634 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NTN3O00634 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NTN3O00634 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.1■□□□□ 0.33
NTN3O00634 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.09■□□□□ 0.33
NTN3O00634 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NTN3O00634 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 PRYP5-201ENST00000451909 266 ntBASIC17.09■□□□□ 0.33
NTN3O00634 BX005266.1-201ENST00000473402 457 ntBASIC17.09■□□□□ 0.33
NTN3O00634 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.09■□□□□ 0.33
NTN3O00634 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.09■□□□□ 0.33
NTN3O00634 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.09■□□□□ 0.33
NTN3O00634 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.09■□□□□ 0.33
NTN3O00634 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NTN3O00634 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NTN3O00634 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NTN3O00634 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.08■□□□□ 0.33
NTN3O00634 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
NTN3O00634 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NTN3O00634 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NTN3O00634 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NTN3O00634 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 SIGLEC16-201ENST00000599858 1437 ntBASIC17.08■□□□□ 0.32
NTN3O00634 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NTN3O00634 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 UPF3AP3-201ENST00000420996 769 ntBASIC17.08■□□□□ 0.32
NTN3O00634 KRT18P27-201ENST00000427733 1299 ntBASIC17.08■□□□□ 0.32
NTN3O00634 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.08■□□□□ 0.32
NTN3O00634 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.08■□□□□ 0.32
NTN3O00634 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.08■□□□□ 0.32
NTN3O00634 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.08■□□□□ 0.32
NTN3O00634 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.08■□□□□ 0.32
NTN3O00634 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.08■□□□□ 0.32
NTN3O00634 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.08■□□□□ 0.32
NTN3O00634 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NTN3O00634 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.32
NTN3O00634 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NTN3O00634 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.07■□□□□ 0.32
NTN3O00634 AC093010.1-201ENST00000473625 1624 ntBASIC17.07■□□□□ 0.32
NTN3O00634 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NTN3O00634 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
NTN3O00634 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.07■□□□□ 0.32
NTN3O00634 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NTN3O00634 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms