Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 IFNL4P1-201ENST00000607083 540 ntBASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 IGHV3-41-201ENST00000613121 348 ntBASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.8■□□□□ 0.44
TMX2-CTNND1H3BSU7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC246785.2-201ENST00000432512 513 ntBASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC104819.1-201ENST00000504587 486 ntBASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC005332.3-201ENST00000589904 676 ntBASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC009053.2-201ENST00000563701 2365 ntBASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.79■□□□□ 0.44
TMX2-CTNND1H3BSU7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC008556.1-201ENST00000610908 2040 ntBASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 TOB2P1-201ENST00000469761 992 ntBASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 UNC93B7-201ENST00000509439 705 ntBASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 RNF126P1-202ENST00000569893 925 ntBASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 Z83836.1-201ENST00000624605 1642 ntBASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMX2-CTNND1H3BSU7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 KRT8P32-201ENST00000512863 1461 ntBASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.77■□□□□ 0.44
TMX2-CTNND1H3BSU7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms