Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 AC112191.1-201ENST00000523689 701 ntBASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 AC009118.2-201ENST00000613275 655 ntBASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC85CA6NKD9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 AC006116.8-202ENST00000587620 1550 ntBASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 FBXW4P1-201ENST00000426721 2239 ntBASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 AL592309.1-201ENST00000443127 649 ntBASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 GIMAP3P-201ENST00000495150 836 ntBASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC85CA6NKD9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 ACA64.2-201ENST00000459014 129 ntBASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC85CA6NKD9 AC092919.2-201ENST00000623631 1645 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 BCYRN1-201ENST00000418539 200 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SPDYE11-202ENST00000450699 704 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SPDYE9P-201ENST00000570642 692 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SPDYE10P-202ENST00000612005 668 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SPDYE8P-202ENST00000612377 668 ntBASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC85CA6NKD9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85CA6NKD9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC85CA6NKD9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms