Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 AP002982.1-201ENST00000492365 877 ntBASIC15.51■□□□□ 0.07
TMEM235A6NFC5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 AC142086.2-201ENST00000569753 217 ntBASIC15.51■□□□□ 0.07
TMEM235A6NFC5 KRT18P55-202ENST00000578578 1546 ntBASIC15.51■□□□□ 0.07
TMEM235A6NFC5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM235A6NFC5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 AC034236.2-201ENST00000606662 1610 ntBASIC15.5■□□□□ 0.07
TMEM235A6NFC5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 AC008040.2-201ENST00000461049 708 ntBASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM235A6NFC5 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.5■□□□□ 0.07
TMEM235A6NFC5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 AL023284.2-201ENST00000405850 579 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM235A6NFC5 MCCD1P1-208ENST00000445732 328 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 KSR1P1-201ENST00000446298 240 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 FAM207BP-201ENST00000447172 505 ntBASIC15.49■□□□□ 0.07
TMEM235A6NFC5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms