Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.9■□□□□ 0.94
PALM3A6NDB9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PALM3A6NDB9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PALM3A6NDB9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
PALM3A6NDB9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PALM3A6NDB9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PALM3A6NDB9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
PALM3A6NDB9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PALM3A6NDB9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.89■□□□□ 0.94
PALM3A6NDB9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.89■□□□□ 0.94
PALM3A6NDB9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 MIR3652-201ENST00000579335 131 ntBASIC20.89■□□□□ 0.93
PALM3A6NDB9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.89■□□□□ 0.93
PALM3A6NDB9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PALM3A6NDB9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.88■□□□□ 0.93
PALM3A6NDB9 Z69720.1-201ENST00000601483 472 ntBASIC20.88■□□□□ 0.93
PALM3A6NDB9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.88■□□□□ 0.93
PALM3A6NDB9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PALM3A6NDB9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 DUSP5P1-201ENST00000441325 1139 ntBASIC20.87■□□□□ 0.93
PALM3A6NDB9 NUS1P1-201ENST00000446295 882 ntBASIC20.87■□□□□ 0.93
PALM3A6NDB9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 AC074051.2-201ENST00000565115 352 ntBASIC20.87■□□□□ 0.93
PALM3A6NDB9 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 AC012313.10-201ENST00000623509 926 ntBASIC20.87■□□□□ 0.93
PALM3A6NDB9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 AC135050.7-201ENST00000624508 2218 ntBASIC20.87■□□□□ 0.93
PALM3A6NDB9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.87■□□□□ 0.93
PALM3A6NDB9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PALM3A6NDB9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PALM3A6NDB9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PALM3A6NDB9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PALM3A6NDB9 ABALON-201ENST00000629058 1903 ntBASIC20.86■□□□□ 0.93
PALM3A6NDB9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms