Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 AC005332.3-201ENST00000589904 676 ntBASIC17.23■□□□□ 0.35
LRIT2A6NDA9 GPR32P1-201ENST00000601788 811 ntBASIC17.23■□□□□ 0.35
LRIT2A6NDA9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.23■□□□□ 0.35
LRIT2A6NDA9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRIT2A6NDA9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 AL645929.1-201ENST00000420084 975 ntBASIC17.22■□□□□ 0.35
LRIT2A6NDA9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 RNF126P1-202ENST00000569893 925 ntBASIC17.22■□□□□ 0.35
LRIT2A6NDA9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRIT2A6NDA9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 AL353692.3-201ENST00000407031 1396 ntBASIC17.21■□□□□ 0.35
LRIT2A6NDA9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 AC087388.1-201ENST00000571370 1112 ntBASIC17.21■□□□□ 0.35
LRIT2A6NDA9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
LRIT2A6NDA9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
LRIT2A6NDA9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.21■□□□□ 0.34
LRIT2A6NDA9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRIT2A6NDA9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRIT2A6NDA9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.2■□□□□ 0.34
LRIT2A6NDA9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRIT2A6NDA9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
LRIT2A6NDA9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRIT2A6NDA9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms