Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TSPY20P-201ENST00000450910 630 ntBASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 C1QBPP2-201ENST00000528754 825 ntBASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 RN7SL471P-201ENST00000580476 299 ntBASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC110285.5-201ENST00000611501 352 ntBASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ITM2C-210ENST00000620962 501 ntBASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV8-6A0A0B4J262 TEX21P-204ENST00000641479 1693 ntBASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 KRT18P16-201ENST00000510337 1294 ntBASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 CROCCP2-202ENST00000412962 2773 ntBASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 UBALD1-205ENST00000590891 2641 ntBASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV8-6A0A0B4J262 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.4□□□□□ -0.27
TRAV8-6A0A0B4J262 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.4□□□□□ -0.27
TRAV8-6A0A0B4J262 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV8-6A0A0B4J262 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRAV8-6A0A0B4J262 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV8-6A0A0B4J262 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms