Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 AC138028.4-201ENST00000564984 1845 ntBASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV9-2A0A087WT02 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 AL023806.1-201ENST00000603994 1649 ntBASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 AC008403.3-201ENST00000598924 454 ntBASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV9-2A0A087WT02 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 UBE2SP1-201ENST00000450587 669 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 RPS2P52-201ENST00000469610 820 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 RN7SL471P-201ENST00000580476 299 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 AC069544.1-201ENST00000609399 999 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 AL121829.2-201ENST00000620908 328 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 PP12613-201ENST00000424958 2230 ntBASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV9-2A0A087WT02 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms