Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYP46A1Q9Y6A2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 AL157888.1-201ENST00000631930 593 ntBASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYP46A1Q9Y6A2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.53■■□□□ 1.04
CYP46A1Q9Y6A2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 KRT18P55-202ENST00000578578 1546 ntBASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PVRIG2P-201ENST00000435460 978 ntBASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 SLC25A3P1-201ENST00000443844 931 ntBASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYP46A1Q9Y6A2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms