Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SCN10AQ9Y5Y9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 KLF4P1-201ENST00000412782 1185 ntBASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN10AQ9Y5Y9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 BX005266.1-201ENST00000473402 457 ntBASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.77■□□□□ 0.75
SCN10AQ9Y5Y9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCN10AQ9Y5Y9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 AC002347.1-201ENST00000569543 541 ntBASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 AC006557.2-201ENST00000592985 1240 ntBASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 MIR1199-201ENST00000621445 119 ntBASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCN10AQ9Y5Y9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 RNA5SP416-201ENST00000516838 111 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AP001160.2-201ENST00000596071 487 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 AL022326.1-202ENST00000641533 845 ntBASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCN10AQ9Y5Y9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms