Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL4A3BPQ9Y5P4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL4A3BPQ9Y5P4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL4A3BPQ9Y5P4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 AC135776.1-201ENST00000319817 2481 ntBASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 KRT18P56-201ENST00000507275 550 ntBASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 NPAP1P7-201ENST00000613027 823 ntBASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 AC016734.2-201ENST00000624325 1377 ntBASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL4A3BPQ9Y5P4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 AC093677.2-201ENST00000600169 1863 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 TSPY22P-201ENST00000427496 604 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 KRT18P48-201ENST00000434763 852 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 TSSC2-201ENST00000450217 709 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 AP003733.1-201ENST00000491725 852 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 KRT8P26-201ENST00000534154 1276 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 AC024563.2-201ENST00000603282 481 ntBASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL4A3BPQ9Y5P4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL4A3BPQ9Y5P4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 Z83836.1-201ENST00000624605 1642 ntBASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL4A3BPQ9Y5P4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms