Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA6Q9Y5G7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ANO7L1-203ENST00000602586 1720 ntBASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 NUS1P1-201ENST00000446295 882 ntBASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RCC2P3-201ENST00000418112 1537 ntBASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA6Q9Y5G7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 KRT18P23-201ENST00000435622 1283 ntBASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 AC111152.3-201ENST00000569699 673 ntBASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 AP002414.4-201ENST00000589764 1148 ntBASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA6Q9Y5G7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA6Q9Y5G7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms