Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 FDX1P1-201ENST00000449115 551 ntBASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 UNC93B7-201ENST00000509439 705 ntBASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AC111152.3-201ENST00000569699 673 ntBASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AC011498.5-201ENST00000592027 486 ntBASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB1Q9Y5F3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHB1Q9Y5F3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB1Q9Y5F3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDHB1Q9Y5F3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDHB1Q9Y5F3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 PVRIG2P-201ENST00000435460 978 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AP000347.1-202ENST00000435868 847 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AC034232.1-201ENST00000506026 1064 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 MIR3180-1-201ENST00000580374 94 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 MIR3917-201ENST00000580971 93 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 MIR3180-3-201ENST00000584616 94 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AC016734.2-201ENST00000624325 1377 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB1Q9Y5F3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AC004870.1-201ENST00000315132 882 ntBASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 BX276092.5-203ENST00000456199 560 ntBASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB1Q9Y5F3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms