Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 KRT89P-201ENST00000620027 1478 ntBASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 HBZP1-201ENST00000354915 429 ntBASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 HYMAI.1-201ENST00000620949 238 ntBASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 AL096828.2-201ENST00000567259 1965 ntBASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB13Q9Y5F0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 LINC01311-201ENST00000565162 1445 ntBASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 AC090340.1-201ENST00000620778 4980 ntBASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHB13Q9Y5F0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB13Q9Y5F0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AC093010.1-201ENST00000473625 1624 ntBASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 MIR662-201ENST00000384847 95 ntBASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 KRT18P48-201ENST00000434763 852 ntBASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms