Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL049812.1-201ENST00000432563 2267 ntBASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 KRT18P28-201ENST00000453838 1332 ntBASIC22.82■■□□□ 1.24
RTCBQ9Y3I0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 AL596442.2-201ENST00000610240 980 ntBASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 AC097374.2-201ENST00000618617 1306 ntBASIC22.81■■□□□ 1.24
RTCBQ9Y3I0 PMPCAP1-201ENST00000508114 1576 ntBASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 AC073621.1-201ENST00000392730 636 ntBASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 AC108751.1-201ENST00000490852 363 ntBASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.8■■□□□ 1.24
RTCBQ9Y3I0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AL499627.1-201ENST00000569373 2188 ntBASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 MCCD1P2-201ENST00000423228 335 ntBASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 AC073592.4-201ENST00000623827 446 ntBASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RTCBQ9Y3I0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 METTL21AP1-201ENST00000438852 635 ntBASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 KRT18P2-201ENST00000447938 1258 ntBASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 AC005829.1-201ENST00000570002 483 ntBASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTCBQ9Y3I0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.77■■□□□ 1.24
RTCBQ9Y3I0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms