Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
FCF1Q9Y324 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FCF1Q9Y324 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FCF1Q9Y324 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FCF1Q9Y324 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 AP000867.3-201ENST00000524675 377 ntBASIC18.37■□□□□ 0.53
FCF1Q9Y324 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.37■□□□□ 0.53
FCF1Q9Y324 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
FCF1Q9Y324 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 AL096828.2-201ENST00000567259 1965 ntBASIC18.37■□□□□ 0.53
FCF1Q9Y324 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FCF1Q9Y324 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 CLEC4GP1-201ENST00000596555 870 ntBASIC18.36■□□□□ 0.53
FCF1Q9Y324 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FCF1Q9Y324 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 AC012313.10-201ENST00000623509 926 ntBASIC18.36■□□□□ 0.53
FCF1Q9Y324 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.36■□□□□ 0.53
FCF1Q9Y324 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 AC093010.1-201ENST00000473625 1624 ntBASIC18.35■□□□□ 0.53
FCF1Q9Y324 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 AL845331.1-201ENST00000424978 1190 ntBASIC18.35■□□□□ 0.53
FCF1Q9Y324 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 AC091607.1-201ENST00000490318 1060 ntBASIC18.35■□□□□ 0.53
FCF1Q9Y324 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
FCF1Q9Y324 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FCF1Q9Y324 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
FCF1Q9Y324 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FCF1Q9Y324 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FCF1Q9Y324 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
FCF1Q9Y324 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FCF1Q9Y324 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms