Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 AC097488.1-201ENST00000507834 756 ntBASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 MIR4651-201ENST00000582622 73 ntBASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 AL359736.2-201ENST00000621992 437 ntBASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
MRPS28Q9Y2Q9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 OR6D1P-203ENST00000641209 4860 ntBASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
MRPS28Q9Y2Q9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 AC116562.2-201ENST00000507042 360 ntBASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 NUDT16P1-203ENST00000513809 620 ntBASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 AC006116.8-202ENST00000587620 1550 ntBASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 AC093010.1-201ENST00000473625 1624 ntBASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRPS28Q9Y2Q9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms