Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
L1RE1Q9UN81 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
L1RE1Q9UN81 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.87■□□□□ 0.77
L1RE1Q9UN81 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.87■□□□□ 0.77
L1RE1Q9UN81 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.87■□□□□ 0.77
L1RE1Q9UN81 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
L1RE1Q9UN81 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 PCDHA12-202ENST00000613593 2588 ntBASIC19.86■□□□□ 0.77
L1RE1Q9UN81 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 AC034232.1-201ENST00000506026 1064 ntBASIC19.86■□□□□ 0.77
L1RE1Q9UN81 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 MIR3917-201ENST00000580971 93 ntBASIC19.86■□□□□ 0.77
L1RE1Q9UN81 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 AC083849.1-201ENST00000615227 514 ntBASIC19.86■□□□□ 0.77
L1RE1Q9UN81 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
L1RE1Q9UN81 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 AC092597.1-201ENST00000487352 616 ntBASIC19.85■□□□□ 0.77
L1RE1Q9UN81 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 AC010240.3-201ENST00000607688 395 ntBASIC19.85■□□□□ 0.77
L1RE1Q9UN81 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
L1RE1Q9UN81 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 AC134043.2-201ENST00000624206 2238 ntBASIC19.84■□□□□ 0.77
L1RE1Q9UN81 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.84■□□□□ 0.77
L1RE1Q9UN81 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms