Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 AL121772.3-201ENST00000610840 674 ntBASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN1Q9UMX0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 AC093677.2-201ENST00000600169 1863 ntBASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 TSPY19P-201ENST00000418461 509 ntBASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 TSPY18P-201ENST00000441642 509 ntBASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 AC138894.3-201ENST00000603787 634 ntBASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN1Q9UMX0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 AC112698.1-201ENST00000510299 916 ntBASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 AC111152.3-201ENST00000569699 673 ntBASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 AC090164.3-201ENST00000610780 2143 ntBASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 AL691432.3-201ENST00000621860 400 ntBASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN1Q9UMX0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 AC091304.2-201ENST00000564639 760 ntBASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 AC005336.2-201ENST00000593183 939 ntBASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBQLN1Q9UMX0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
UBQLN1Q9UMX0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBQLN1Q9UMX0 AL096828.2-201ENST00000567259 1965 ntBASIC19.39■□□□□ 0.7
UBQLN1Q9UMX0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.39■□□□□ 0.69
UBQLN1Q9UMX0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBQLN1Q9UMX0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms