Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AC009065.1-201ENST00000564055 1225 ntBASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AC069148.1-201ENST00000608741 768 ntBASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF3C4Q9UKN8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 RNF126P1-202ENST00000569893 925 ntBASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GTF3C4Q9UKN8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GTF3C4Q9UKN8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GTF3C4Q9UKN8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 AC008764.6-201ENST00000595909 2069 ntBASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GTF3C4Q9UKN8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms