Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ECEL1P3-201ENST00000427961 737 ntBASIC18.79■□□□□ 0.6
SAE1Q9UBE0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAE1Q9UBE0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 AC145285.6-201ENST00000604632 637 ntBASIC18.78■□□□□ 0.6
SAE1Q9UBE0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.78■□□□□ 0.6
SAE1Q9UBE0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SAE1Q9UBE0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.6
SAE1Q9UBE0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.77■□□□□ 0.6
SAE1Q9UBE0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 AC009065.1-201ENST00000564055 1225 ntBASIC18.77■□□□□ 0.6
SAE1Q9UBE0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 AL157888.1-201ENST00000631930 593 ntBASIC18.77■□□□□ 0.6
SAE1Q9UBE0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAE1Q9UBE0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SAE1Q9UBE0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 AC132938.6-201ENST00000623828 1655 ntBASIC18.76■□□□□ 0.59
SAE1Q9UBE0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 GNAS-203ENST00000306120 1878 ntBASIC18.76■□□□□ 0.59
SAE1Q9UBE0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SAE1Q9UBE0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms