Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 AL356309.3-201ENST00000624132 1934 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 PMS2P7-201ENST00000506558 1336 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 RPS2P28-201ENST00000314255 741 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 IGHV3-22-201ENST00000520721 359 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 AC025062.2-201ENST00000605477 670 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 ZNF259P1-201ENST00000407656 1365 ntBASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HCFC1R1Q9NWW0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 AC104109.2-201ENST00000602919 1418 ntBASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 AC092910.1-201ENST00000482027 1129 ntBASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HCFC1R1Q9NWW0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1R1Q9NWW0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1R1Q9NWW0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1R1Q9NWW0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HCFC1R1Q9NWW0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HCFC1R1Q9NWW0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 OR7E14P-202ENST00000530490 1290 ntBASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 AC126763.1-201ENST00000552015 2118 ntBASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HCFC1R1Q9NWW0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 ESPNP-201ENST00000270691 2015 ntBASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 AC098831.1-202ENST00000438821 336 ntBASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 NKAPP1-205ENST00000585790 367 ntBASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.75■□□□□ 0.59
HCFC1R1Q9NWW0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms