Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEUROD4Q9HD90 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 FAM87A-204ENST00000613235 858 ntBASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 AC026471.1-201ENST00000564629 3026 ntBASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
NEUROD4Q9HD90 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 AC009947.2-201ENST00000444014 672 ntBASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 AL024508.2-201ENST00000607749 1894 ntBASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 AC005332.8-201ENST00000622750 2735 ntBASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.15■□□□□ 0.34
NEUROD4Q9HD90 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NEUROD4Q9HD90 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
NEUROD4Q9HD90 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NEUROD4Q9HD90 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
NEUROD4Q9HD90 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEUROD4Q9HD90 INGX-201ENST00000359239 846 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms