Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 AC116407.3-201ENST00000623905 1129 ntBASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPAP3Q9H6T3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.83■□□□□ 0.92
RPAP3Q9H6T3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 KRT18P58-201ENST00000527480 1120 ntBASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPAP3Q9H6T3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 RPS2P1-201ENST00000434010 821 ntBASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 POLD2P1-201ENST00000511220 997 ntBASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 AC117500.6-201ENST00000624871 588 ntBASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 ESPNP-201ENST00000270691 2015 ntBASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 AC126763.1-201ENST00000552015 2118 ntBASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RPAP3Q9H6T3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 RPS2P28-201ENST00000314255 741 ntBASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 AL356309.3-201ENST00000624132 1934 ntBASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPAP3Q9H6T3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms