Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.61■□□□□ 0.73
CDT1Q9H211 AC138894.3-201ENST00000603787 634 ntBASIC19.61■□□□□ 0.73
CDT1Q9H211 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDT1Q9H211 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDT1Q9H211 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDT1Q9H211 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
CDT1Q9H211 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.6■□□□□ 0.73
CDT1Q9H211 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDT1Q9H211 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CDT1Q9H211 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.6■□□□□ 0.73
CDT1Q9H211 AC112698.1-201ENST00000510299 916 ntBASIC19.6■□□□□ 0.73
CDT1Q9H211 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 AL732292.2-201ENST00000609649 430 ntBASIC19.6■□□□□ 0.73
CDT1Q9H211 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.6■□□□□ 0.73
CDT1Q9H211 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.6■□□□□ 0.73
CDT1Q9H211 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
CDT1Q9H211 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CDT1Q9H211 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDT1Q9H211 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.59■□□□□ 0.73
CDT1Q9H211 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.59■□□□□ 0.73
CDT1Q9H211 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.59■□□□□ 0.73
CDT1Q9H211 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 TSPY19P-201ENST00000418461 509 ntBASIC19.59■□□□□ 0.73
CDT1Q9H211 TSPY18P-201ENST00000441642 509 ntBASIC19.59■□□□□ 0.73
CDT1Q9H211 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.59■□□□□ 0.73
CDT1Q9H211 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.59■□□□□ 0.73
CDT1Q9H211 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.59■□□□□ 0.73
CDT1Q9H211 BNIP3P18-201ENST00000593976 575 ntBASIC19.59■□□□□ 0.73
CDT1Q9H211 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.59■□□□□ 0.73
CDT1Q9H211 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.59■□□□□ 0.73
CDT1Q9H211 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDT1Q9H211 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.58■□□□□ 0.73
CDT1Q9H211 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDT1Q9H211 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
CDT1Q9H211 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDT1Q9H211 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.58■□□□□ 0.73
CDT1Q9H211 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.58■□□□□ 0.73
CDT1Q9H211 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDT1Q9H211 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.58■□□□□ 0.73
CDT1Q9H211 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDT1Q9H211 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDT1Q9H211 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms