Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD4Q9H0A8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 AC012317.2-201ENST00000623305 2251 ntBASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 PRORSD1P-202ENST00000563365 2154 ntBASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 CD99P1-205ENST00000527459 561 ntBASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 AC008622.2-201ENST00000617006 1229 ntBASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD4Q9H0A8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 AC011506.1-201ENST00000474329 610 ntBASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 AF186192.3-201ENST00000583427 947 ntBASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 GPAT2P1-201ENST00000444924 1672 ntBASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD4Q9H0A8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 AC009102.3-201ENST00000623118 1491 ntBASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 AC128676.1-201ENST00000454392 318 ntBASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 C1QBPP2-201ENST00000528754 825 ntBASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 AP000692.2-201ENST00000608391 879 ntBASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COMMD4Q9H0A8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms