Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNTNAP3Q9BZ76 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 TFAMP1-201ENST00000412727 736 ntBASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ATP5G2P4-201ENST00000442175 420 ntBASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ABCD1P5-201ENST00000445663 754 ntBASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CNTNAP3Q9BZ76 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AL139288.1-201ENST00000623748 933 ntBASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 INTS4P1-201ENST00000438455 1935 ntBASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.23■□□□□ 0.35
CNTNAP3Q9BZ76 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 KRT8P7-201ENST00000533003 1432 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 TSPY16P-201ENST00000449843 468 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AC073592.5-201ENST00000624854 528 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AC005593.1-201ENST00000624894 515 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AP000867.4-201ENST00000641616 219 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 GPR89P-201ENST00000407924 1495 ntBASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNTNAP3Q9BZ76 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms