Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DUXAP6-201ENST00000553858 601 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 HNRNPA1P74-201ENST00000560782 835 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 GCSHP2-201ENST00000560971 527 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AC002519.2-203ENST00000567043 837 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 RAP2CP1-202ENST00000605179 643 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AC124016.2-201ENST00000610058 665 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 USP12-203ENST00000620323 349 ntTSL 3 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AL513190.1-201ENST00000621254 727 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 Z69908.1-201ENST00000622603 247 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AP002505.2-201ENST00000623585 696 ntBASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP3-3Q9BYR6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 MYEF2-217ENST00000620867 1742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC079062.1-201ENST00000584544 1396 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF602P-201ENST00000405929 924 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC098826.1-201ENST00000433943 471 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC012513.2-201ENST00000441511 1137 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 VN1R25P-201ENST00000443385 738 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01736-201ENST00000445339 654 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC027612.2-202ENST00000445955 1199 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 RBMY2BP-202ENST00000451071 1156 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 MTND2P30-201ENST00000456663 382 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 SNORA3.4-201ENST00000515969 96 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC087883.1-201ENST00000551882 391 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 WASH3P-206ENST00000559884 427 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC007595.1-201ENST00000576710 483 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01872-201ENST00000594261 915 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC026202.3-201ENST00000600805 1127 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 OR4H6P-202ENST00000603819 340 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AL136363.2-201ENST00000604173 851 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 ECSCR-201ENST00000618155 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC022079.2-201ENST00000619739 566 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.32□□□□□ -0.6
KRTAP3-3Q9BYR6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 AC117457.1-201ENST00000614557 1391 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
KRTAP3-3Q9BYR6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms