Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AC073592.4-201ENST00000623827 446 ntBASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTFDC1Q9BY42 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 AC079776.2-201ENST00000641154 1609 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 KRT18P27-201ENST00000427733 1299 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 AC004967.1-201ENST00000453589 447 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 RNA5SP416-201ENST00000516838 111 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 MIR3687-2-201ENST00000577708 61 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 MIR3687-1-201ENST00000614492 61 ntBASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTFDC1Q9BY42 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTFDC1Q9BY42 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RTFDC1Q9BY42 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 AC007967.3-201ENST00000434308 558 ntBASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 AL355385.1-201ENST00000606123 409 ntBASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RTFDC1Q9BY42 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 PMPCAP1-201ENST00000508114 1576 ntBASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.94■■□□□ 1.1
RTFDC1Q9BY42 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RTFDC1Q9BY42 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms