Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 AL096828.2-201ENST00000567259 1965 ntBASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 RNF126P1-202ENST00000569893 925 ntBASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 AC005332.3-201ENST00000589904 676 ntBASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCM2Q9BSQ5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC135050.7-201ENST00000624508 2218 ntBASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 ABALON-201ENST00000629058 1903 ntBASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC093010.1-201ENST00000473625 1624 ntBASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC011498.5-201ENST00000592027 486 ntBASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 AC004263.2-201ENST00000617183 678 ntBASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CCM2Q9BSQ5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 LINC00602-201ENST00000629776 2065 ntBASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.83■□□□□ 0.45
CCM2Q9BSQ5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCM2Q9BSQ5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms