Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AC112777.1-201ENST00000540175 1423 ntBASIC21.12■□□□□ 0.97
SDF4Q9BRK5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.12■□□□□ 0.97
SDF4Q9BRK5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AC067852.2-201ENST00000590513 2313 ntBASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AC135776.1-201ENST00000319817 2481 ntBASIC21.11■□□□□ 0.97
SDF4Q9BRK5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AL031133.1-201ENST00000406807 723 ntBASIC21.11■□□□□ 0.97
SDF4Q9BRK5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 AC024243.1-201ENST00000609234 778 ntBASIC21.11■□□□□ 0.97
SDF4Q9BRK5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SDF4Q9BRK5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 STARP1-201ENST00000397973 869 ntBASIC21.1■□□□□ 0.97
SDF4Q9BRK5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 KRT18P38-201ENST00000449496 1282 ntBASIC21.1■□□□□ 0.97
SDF4Q9BRK5 AL671277.2-201ENST00000458060 996 ntBASIC21.1■□□□□ 0.97
SDF4Q9BRK5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.1■□□□□ 0.97
SDF4Q9BRK5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SDF4Q9BRK5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AC034232.1-201ENST00000506026 1064 ntBASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AC112497.1-201ENST00000624824 639 ntBASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.09■□□□□ 0.97
SDF4Q9BRK5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF4Q9BRK5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms