Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
ARXQ96QS3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.8■■□□□ 1.4
ARXQ96QS3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.8■■□□□ 1.4
ARXQ96QS3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.8■■□□□ 1.4
ARXQ96QS3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.8■■□□□ 1.4
ARXQ96QS3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARXQ96QS3 AC005332.8-201ENST00000622750 2735 ntBASIC23.8■■□□□ 1.4
ARXQ96QS3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ARXQ96QS3 TEX21P-204ENST00000641479 1693 ntBASIC23.79■■□□□ 1.4
ARXQ96QS3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 TREX1-205ENST00000625293 1783 ntBASIC23.79■■□□□ 1.4
ARXQ96QS3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.79■■□□□ 1.4
ARXQ96QS3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.79■■□□□ 1.4
ARXQ96QS3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ARXQ96QS3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.79■■□□□ 1.4
ARXQ96QS3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.79■■□□□ 1.4
ARXQ96QS3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.79■■□□□ 1.4
ARXQ96QS3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ARXQ96QS3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.79■■□□□ 1.4
ARXQ96QS3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ARXQ96QS3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
ARXQ96QS3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
ARXQ96QS3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.78■■□□□ 1.4
ARXQ96QS3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 UPF3AP3-201ENST00000420996 769 ntBASIC23.78■■□□□ 1.4
ARXQ96QS3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.78■■□□□ 1.4
ARXQ96QS3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
ARXQ96QS3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
ARXQ96QS3 AC005332.3-201ENST00000589904 676 ntBASIC23.78■■□□□ 1.4
ARXQ96QS3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.78■■□□□ 1.4
ARXQ96QS3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.78■■□□□ 1.4
ARXQ96QS3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC23.78■■□□□ 1.4
ARXQ96QS3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ARXQ96QS3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
ARXQ96QS3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
ARXQ96QS3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.77■■□□□ 1.4
ARXQ96QS3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.77■■□□□ 1.4
ARXQ96QS3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 AC125437.2-201ENST00000625180 2167 ntBASIC23.77■■□□□ 1.4
ARXQ96QS3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 NUS1P2-201ENST00000417358 873 ntBASIC23.77■■□□□ 1.4
ARXQ96QS3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.77■■□□□ 1.4
ARXQ96QS3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.77■■□□□ 1.4
ARXQ96QS3 PGAM5P1-201ENST00000518923 814 ntBASIC23.77■■□□□ 1.4
ARXQ96QS3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ARXQ96QS3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ARXQ96QS3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ARXQ96QS3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
ARXQ96QS3 AL109659.2-201ENST00000606809 1674 ntBASIC23.76■■□□□ 1.39
ARXQ96QS3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC23.76■■□□□ 1.39
ARXQ96QS3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms