Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 AL390719.1-204ENST00000412397 1219 ntBASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RAB3IPQ96QF0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 TUBB8P6-201ENST00000436895 1288 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 KRT18P16-201ENST00000510337 1294 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 RARRES2P6-201ENST00000567333 442 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 AC087623.3-201ENST00000607047 1098 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 LINC01126-201ENST00000623515 1646 ntBASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RAB3IPQ96QF0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 AC106886.4-201ENST00000623557 2502 ntBASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 AC026271.2-201ENST00000428091 497 ntBASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 AC034268.1-201ENST00000441047 882 ntBASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RAB3IPQ96QF0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RAB3IPQ96QF0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB3IPQ96QF0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB3IPQ96QF0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms