Protein–RNA interactions for Protein: Q96Q35

ALS2CR12, Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 12 protein, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12Q96Q35 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
ALS2CR12Q96Q35 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ALS2CR12Q96Q35 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC009102.3-201ENST00000623118 1491 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 KRT18P55-202ENST00000578578 1546 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 GPAT2P1-201ENST00000444924 1672 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 RN7SL471P-201ENST00000580476 299 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AC108860.2-201ENST00000562760 2183 ntBASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ALS2CR12Q96Q35 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 MIR149-201ENST00000384879 89 ntBASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 AC128676.1-201ENST00000454392 318 ntBASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 MIR6786-201ENST00000616843 113 ntBASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ALS2CR12Q96Q35 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ALS2CR12Q96Q35 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 SDHAP2-201ENST00000455183 2001 ntBASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 B3GAT3P1-201ENST00000471720 806 ntBASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 MIR4651-201ENST00000582622 73 ntBASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 AC093010.1-201ENST00000473625 1624 ntBASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.39■□□□□ 0.69
ALS2CR12Q96Q35 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.38■□□□□ 0.69
ALS2CR12Q96Q35 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms